一株金黄色葡萄球菌噬菌体 SAK84P 的分离鉴定
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广东省合成基因组学重点实验室项目(2019B030301006);深圳市合成基因组学重点实验室项目(ZDSYS201802061806209)


Isolation and Identification of Bacteriophage SAK84P Infecting
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Guangdong Provincial Key Laboratory of Synthetic Genomics (2019B030301006), Shenzhen Key Laboratory of Synthetic Genomics (ZDSYS201802061806209)

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    摘要:

    金黄色葡萄球菌(Staphylococcus aureus,S. aureus)是一类革兰氏阳性致病菌,临床分离株通常对于多种抗生素具有耐药性。从该菌中分离出高效、广谱的专一性噬菌体,对于治疗临床耐药金黄色葡萄球菌的感染具有重要意义。该文以 S. aureus K84 为宿主菌,从污水中分离出一株烈性噬菌体SAK84P。通过透射电镜观察到,该噬菌体头部呈六边形,直径为 112 nm,尾部长度为 200 nm,具有肌尾噬菌体形态特征。稳定性实验测定表明,当 pH 为 5.0~7.0、温度为 37~50 ℃ 时,SAK84P 的活性较高;一步生长曲线显示,其潜伏期为 20 min,裂解量可达 100 PFU/cell;通过基因组测序显示,其全基因组长度为 141 535 bp,GC 含量为 30%,编码 224 个开放阅读框和 4 个 tRNA 基因;系统发育树表明该噬菌体属于螺旋噬菌体科(Herelleviridae)中的 Kayvirus 属。噬菌体 SAK84P 裂解谱较广,可以裂解多株不同的 S. aureus,且具有较高的裂解活性。基因组注释显示,其不含已知的耐药基因及毒力基因,且具有治疗临床多重耐药金黄色葡萄球菌感染的潜力。

    Abstract:

    Staphylococcus aureus is a gram-positive pathogen. The clinical isolates are usually resistant to multiple antibiotics. Therefore, it is of great significance to find specific phages with high efficiency and broad host spectrum for the treatment of clinical drug-resistant S. aureus infection. Using S. aureus K84 as the host, lytic phage SAK84P was isolated from sewage. The phage has a hexagonal head with 112 nm in diameter and a contractile tail with 200 nm in length. Based on the morphology, the phage can be classified as myovirus. It has the optimal growth pH between 5.0~7.0, growth temperature between 37~50 ℃, the one-step growth curve shows its duration time is 20 min, and burst size of 100 PFU/cell. Whole genome sequencing shows the phage has a total genome length of 141 535 bp with 30% of GC content, and encodes 224 open reading frames and 4 tRNA genes. The phylogenetic tree diagram shows that the phage belongs to the Kayvirus genus in the family of Herelleviridae. The results also shows that phage SAK84P has a broad host range and can lyse multiple clinic isolates of S. aureus with a high activity. Genome annotations indicate no known resistance genes or virulence genesinthe genome of phage SAK84P, suggesting its potential for treatment of clinical multidrug-resistant S. aureus infection.

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引文格式
黎晏辰,刘自强,赵敏,等.一株金黄色葡萄球菌噬菌体 SAK84P 的分离鉴定 [J].集成技术,2022,11(2):1-11

Citing format
LI Yanchen, LIU Ziqiang, ZHAO Min, et al. Isolation and Identification of Bacteriophage SAK84P Infecting[J]. Journal of Integration Technology,2022,11(2):1-11

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  • 在线发布日期: 2022-03-22
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